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Nobel Prize in Chemistry for Bio-Inspired Catalysts

The Nobel Prize in Chemistry in 2021 has been awarded to German Benjamin List and British David MacMillan.
Prof Stefan Howorka from the ISMB at UCL Chemistry explains: ‘The two researchers have developed a new class of catalysts that are inspired by Nature. Enzymes are widely used in biology as they initiate and specifically control biochemical reactions to achieve the desired stereochemistry while limiting the creation of undesirable by-products. Reconstructing these catalytic functions with smaller and cheaper synthetic units is of considerable scientific and industrial interest. Ideally, synthetic catalysts should also avoid precious metals such as platinum which are not environmentally friendly.
List and MacMillan succeeded independently of each other in developing efficient biomimetic and “green” catalysts. In the late 1990s, List wondered whether amino acids found in the enzymes’ active site would also be able to achieve part of the same catalytic role if added in isolation. As proof-of-principle, List tested the catalytic properties of proline and related compounds in an aldol reaction. The specific question was whether the use of a chiral proline would control the stereochemical outcome of the reaction. Indeed, the chirality of the catalyst controlled which enantiomer of the aldol products was formed.
MacMillan was working in the same field. MacMillan was motivated to develop new catalysts that avoid the widely used metals. Rather, he focused on environmentally harmless and inexpensive organic frameworks that contain -in addition to carbon- oxygen, nitrogen, sulphur or phosphorous. Similar to List, MacMillan also tested chiral versions of his organic catalysts but with a different reaction, the Diels-Alder cycloaddition. The reaction was successful as enantiopure products formed depending on the chirality of the catalysts.
Reflecting the catalysts’ composition and enantioselective control, MacMillan coined the term ‘asymmetric organocatalysis’ This new field has grown dramatically and develops simple, easy-to-manufacture and environmentally friendly catalyst. This has a huge impact in science and industry to produce new pharmaceuticals or molecules that can capture light in solar cells. This year’s Nobel prize and the Nobel prize given in 2018 for ‘the directed evolution of enzymes’ underscore the importance of developing new catalytic tools, Prof Howorka concludes.

References:
J. Am. Chem. Soc. 2000, 122, 2395-2396; J. Am. Chem. Soc. 2000, 122, 4243-4244

Posted by ubcg49z in Commentaries, News, Uncategorised

Rosetrees Trust Grant

The Wallace Group has recently received a 3-year grant from the Rosetrees
Trust
for work on: ‘“Seeing” General Anaesthetics Bound to Sodium
Channels: Using Novel Structure/Function Information for Molecular
Understanding and Design, Enabling Improved Function and Safety
’ – a
collaboration with Professor Hugh Hemmings’ Lab at the Weill Cornell Medical
Centre
in New York.

Posted by ubpfos001 in Grants awarded, News, Uncategorised

Professor Steven Perkins’ paper featured on the cover of Biochemical Journal

Professor Steven Perkins (Professor of Structural Biochemistry, UCL) made the front cover of October’s Biochemical Journal (vol. 476, issue 19) with his latest paper:

Crystal structure of zinc-α2-glycoprotein in complex with a fatty acid reveals multiple different modes of protein-lipid binding

A joint project with UCL Medicine and the University of Bedfordshire, it is a combination of work done on Professor Perkins’ new analytical ultracentrifuge, protein crystallography and recombinant proteins.

Citation: Lau, A. M., Zahid, H., Gor, J., Perkins, S. J., Coker, A. R. & McDermott, L. C. (2019) Crystal structure of zinc-α2-glycoprotein in complex with a fatty acid reveals multiple different modes of lipid binding. Biochem. J. 476, 2815-2834.
Posted by ubcg49z in News, Publications, Uncategorised

Dr Anthony Roberts’s group determine the cryo-EM structure of the molecular motor dynein-2

Work from Dr Anthony Roberts’s laboratory in the ISMB, in collaboration with Dr Andrew Carter’s group at the MRC-LMB in Cambridge, has determined the cryo-EM structure of the motor protein dynein-2, which transports cargoes and signalling molecules within cilia and flagella. Dynein-2 is fundamental to human development and its dysfunction is associated with short-rib thoracic dysplasias with or without polydactyly; inherited disorders characterised by abnormal rib cage development with severe, often life-threatening, consequences.
The research – which was funded by the Wellcome Trust, Royal Society, BBSRC and MRC – is published in Nature Structural & Molecular Biology: https://www.nature.com/articles/s41594-019-0286-y
The Roberts group was recently awarded a Wellcome Trust Senior Research Fellowship to further their studies on the mechanism of transport within cilia and flagella.
Posted by ublmcr01 in Uncategorised

Two new grants awarded to Dr Giulia Zanetti’s research group

Dr Giulia Zanetti’s research group has been awarded two new grants.

A European Research Council (ERC) Starting Grant was awarded for a project which shows how coat assembly can deliver the flexibility necessary to accommodate a wide variety of cargo proteins, and how the process can be regulated. Her focus is on COPII coat, which mediates export from the endoplasmic reticulum (ER) of about a third of newly synthesized proteins. The aim of the project is to understand the molecular interactions between coat components and understand their role in determination of coat architecture and membrane shape.

Full details are available here.

A Biotechnology and Biological Sciences Research Council (BBSRC) grant was awarded for another project whose overall objective is to dissect the molecular mechanisms involved in COPII coat budding, and in particular to assess the dynamic regulation of the various levels of coat assembly and its role in flexible membrane remodelling.

Further details of Dr Zanetti’s research can be found on her lab website.

Posted by ublmcr01 in Uncategorised

Research symposium to be held in honour of Willie Taylor on 20th September

Patterns in Protein Sequence and Structure (Reloaded)

This research symposium will be held at Birkbeck in honour of Willie Talyor on 20th September 2019, celebrating 40 years of his pioneering research in computational biology.

This symposium will bring together past and current collaborators and scientists inspired by Willie Taylor’s research. For those wondering about the title, this symposium also marks 30 years since the landmark conference of the same name was held at EMBL in Heidelberg, which in many respects marked the start of the modern bioinformatics era. Willie was one of the organisers of that meeting, and a number of the speakers from that conference will also be speaking in this symposium.

Full details and tickets are available here.

Posted by ublmcr01 in Uncategorised

ISMB staff retreat 2019 at London Zoo

On a sunny day in June, just before the summer solstice, staff from the ISMB at UCL and Birkbeck had their (now) annual retreat this year at the London Zoo. In our busy lives as academics, these away-days provide us with the rare opportunity to catch up with our colleagues from across Torrington Place in a relaxed atmosphere and to make new friends!

We met at the Terrace Restaurant in the ‘Outback’, where we kick-started the day with tea and coffee, surrounded by emus and wallabies. Tabitha had expertly prepared maps that indicated our exploratory trail through the Zoo, incorporating show-and-tell and feeding times for maximum knowledge gathering and entertainment. Watching dragons, flightless birds, pigs and monkeys with moustaches and coatis – which is not pronounced like the garment (I learned that day), but rather co-ah-ti, gave people plenty to discuss over a very nice BBQ-style lunch back at the restaurant.  We then had time to continue our short trip round the zoo to catch up with some more amazing animals before listening to the two science presentations by Drs Alexa Varah and Nathalie Petorelli from the Institute of Zoology about ‘The costs of herbicide resistance in UK agriculture’ and ‘Satellite remote sensing – a conservation revolution’. Despite the fact that our research at the ISMB is somewhat remote from these topics, there was great interest from the audience and lively discussions ensued. It was a brilliant day out, and I’m looking much forward to the retreat in 2020.

Tine Arnvig, UCL-ISMB


Flightless birds


Monkey with moustache


Men in blue


See-through butterfly

Posted by ublmcr01 in Events, News, Uncategorised